Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HCFC1P51610 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.69□□□□□ -0.38
HCFC1P51610 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.69□□□□□ -0.38
HCFC1P51610 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.69□□□□□ -0.38
HCFC1P51610 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
HCFC1P51610 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 AC009084.3-201ENST00000623356 437 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HCFC1P51610 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HCFC1P51610 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC092580.1-201ENST00000433998 658 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 DPY19L2P5-201ENST00000456300 331 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.69□□□□□ -0.38
HCFC1P51610 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 AC105137.3-201ENST00000617588 984 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.69□□□□□ -0.38
HCFC1P51610 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
HCFC1P51610 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.68□□□□□ -0.38
HCFC1P51610 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.68□□□□□ -0.38
HCFC1P51610 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 KRT8P1-201ENST00000557533 1207 ntBASIC12.68□□□□□ -0.38
HCFC1P51610 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.68□□□□□ -0.38
HCFC1P51610 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.68□□□□□ -0.38
HCFC1P51610 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HCFC1P51610 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.68□□□□□ -0.38
HCFC1P51610 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms