Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 KRT8P35-201ENST00000483942 1338 ntBASIC13.08□□□□□ -0.32
CD40LGP29965 PCDHA6-201ENST00000378126 3267 ntBASIC13.08□□□□□ -0.32
CD40LGP29965 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD40LGP29965 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD40LGP29965 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CD40LGP29965 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.07□□□□□ -0.32
CD40LGP29965 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.07□□□□□ -0.32
CD40LGP29965 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 AZGP1P1-201ENST00000411909 902 ntBASIC13.07□□□□□ -0.32
CD40LGP29965 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.07□□□□□ -0.32
CD40LGP29965 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CD40LGP29965 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.07□□□□□ -0.32
CD40LGP29965 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 AC015910.1-201ENST00000579400 975 ntBASIC13.07□□□□□ -0.32
CD40LGP29965 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 AC012531.1-201ENST00000562848 2680 ntBASIC13.07□□□□□ -0.32
CD40LGP29965 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CD40LGP29965 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CD40LGP29965 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD40LGP29965 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CD40LGP29965 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CD40LGP29965 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.06□□□□□ -0.32
CD40LGP29965 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.06□□□□□ -0.32
CD40LGP29965 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 AC140658.5-201ENST00000438532 169 ntBASIC13.06□□□□□ -0.32
CD40LGP29965 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.06□□□□□ -0.32
CD40LGP29965 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.06□□□□□ -0.32
CD40LGP29965 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.06□□□□□ -0.32
CD40LGP29965 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.06□□□□□ -0.32
CD40LGP29965 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.06□□□□□ -0.32
CD40LGP29965 FAM86C2P-203ENST00000528684 1004 ntBASIC13.06□□□□□ -0.32
CD40LGP29965 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.06□□□□□ -0.32
CD40LGP29965 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.06□□□□□ -0.32
CD40LGP29965 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 AC073389.1-201ENST00000595595 795 ntBASIC13.06□□□□□ -0.32
CD40LGP29965 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 PCDHB19P-202ENST00000625133 2914 ntBASIC13.06□□□□□ -0.32
CD40LGP29965 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
CD40LGP29965 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CD40LGP29965 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms