Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH3P22223 FAM86MP-201ENST00000340703 885 ntBASIC14.51□□□□□ -0.09
CDH3P22223 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH3P22223 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH3P22223 FTLP10-202ENST00000505798 471 ntBASIC14.51□□□□□ -0.09
CDH3P22223 COX5BP1-201ENST00000507622 393 ntBASIC14.51□□□□□ -0.09
CDH3P22223 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 MIR4741-201ENST00000579822 90 ntBASIC14.51□□□□□ -0.09
CDH3P22223 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH3P22223 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH3P22223 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CDH3P22223 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH3P22223 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 AL391280.1-201ENST00000506969 1062 ntBASIC14.5□□□□□ -0.09
CDH3P22223 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 AP006547.1-201ENST00000563435 692 ntBASIC14.5□□□□□ -0.09
CDH3P22223 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH3P22223 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH3P22223 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH3P22223 AC004466.1-201ENST00000599515 1080 ntBASIC14.5□□□□□ -0.09
CDH3P22223 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH3P22223 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH3P22223 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH3P22223 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH3P22223 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH3P22223 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH3P22223 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms