Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA1P20827 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA1P20827 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EFNA1P20827 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA1P20827 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EFNA1P20827 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNA1P20827 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EFNA1P20827 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
EFNA1P20827 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
EFNA1P20827 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 ENPP7P5-201ENST00000541031 1031 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNA1P20827 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 AC145423.3-201ENST00000615987 467 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 RPSAP52-203ENST00000622976 1023 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
EFNA1P20827 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 AC015688.4-201ENST00000580780 1647 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EFNA1P20827 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
EFNA1P20827 AC011498.7-201ENST00000624986 2027 ntBASIC14.07□□□□□ -0.16
EFNA1P20827 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNA1P20827 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA1P20827 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
EFNA1P20827 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.06□□□□□ -0.16
EFNA1P20827 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 MST1P2-201ENST00000457982 2291 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 RN7SKP230-201ENST00000365642 335 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.06□□□□□ -0.16
EFNA1P20827 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
EFNA1P20827 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 AC022137.2-201ENST00000503482 481 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.06□□□□□ -0.16
EFNA1P20827 CICP17-201ENST00000418553 2377 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
EFNA1P20827 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA1P20827 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.06□□□□□ -0.16
EFNA1P20827 CLUHP2-201ENST00000426660 1303 ntBASIC14.06□□□□□ -0.16
EFNA1P20827 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.06□□□□□ -0.16
EFNA1P20827 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.06□□□□□ -0.16
EFNA1P20827 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
EFNA1P20827 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA1P20827 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNA1P20827 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms