Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.21□□□□□ -0.14
CAPN3P20807 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.21□□□□□ -0.14
CAPN3P20807 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CAPN3P20807 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.21□□□□□ -0.14
CAPN3P20807 AL136172.1-201ENST00000598590 1394 ntBASIC14.21□□□□□ -0.14
CAPN3P20807 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CAPN3P20807 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 AC111170.3-201ENST00000624282 2464 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 AC099521.3-201ENST00000624251 2938 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 DGCR9-201ENST00000609630 2415 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 SPDYE19P-201ENST00000338590 713 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 FAM86MP-201ENST00000340703 885 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CAPN3P20807 RNU1-114P-201ENST00000365297 166 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 GNAQP1-201ENST00000444815 1067 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 AC055876.2-201ENST00000531834 546 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.2□□□□□ -0.14
CAPN3P20807 AC093813.1-201ENST00000605066 256 ntBASIC14.2□□□□□ -0.14
CAPN3P20807 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CAPN3P20807 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CAPN3P20807 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CAPN3P20807 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CAPN3P20807 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CAPN3P20807 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.19□□□□□ -0.14
CAPN3P20807 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.19□□□□□ -0.14
CAPN3P20807 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 AC007969.1-201ENST00000433675 447 ntBASIC14.19□□□□□ -0.14
CAPN3P20807 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.19□□□□□ -0.14
CAPN3P20807 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 AC022616.1-201ENST00000518688 554 ntBASIC14.19□□□□□ -0.14
CAPN3P20807 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.19□□□□□ -0.14
CAPN3P20807 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.19□□□□□ -0.14
CAPN3P20807 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.19□□□□□ -0.14
CAPN3P20807 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.19□□□□□ -0.14
CAPN3P20807 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 SLC7A15P-201ENST00000424028 1363 ntBASIC14.19□□□□□ -0.14
CAPN3P20807 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.19□□□□□ -0.14
CAPN3P20807 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CAPN3P20807 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CAPN3P20807 AC090643.2-201ENST00000623442 2029 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms