Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ERCC3P19447 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC3P19447 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC3P19447 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC3P19447 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC3P19447 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ERCC3P19447 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC3P19447 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC3P19447 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
ERCC3P19447 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC3P19447 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 AC069218.1-201ENST00000435269 762 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 AC073150.1-201ENST00000450406 1084 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.03■□□□□ 0.32
ERCC3P19447 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.03■□□□□ 0.32
ERCC3P19447 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ERCC3P19447 AC242376.1-201ENST00000559033 726 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 AC009884.2-201ENST00000603110 324 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 MIR6720-201ENST00000611664 98 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC3P19447 AC023090.2-201ENST00000625182 2110 ntBASIC17.03■□□□□ 0.32
ERCC3P19447 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ERCC3P19447 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC3P19447 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ERCC3P19447 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ERCC3P19447 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
ERCC3P19447 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC3P19447 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC3P19447 AC006453.1-201ENST00000636037 1257 ntBASIC17.02■□□□□ 0.32
ERCC3P19447 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC3P19447 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ERCC3P19447 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
ERCC3P19447 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.02■□□□□ 0.31
ERCC3P19447 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ERCC3P19447 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.02■□□□□ 0.31
ERCC3P19447 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
ERCC3P19447 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.02■□□□□ 0.31
ERCC3P19447 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC3P19447 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC3P19447 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms