Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.11■□□□□ 0.01
ERCC2P18074 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.11■□□□□ 0.01
ERCC2P18074 RNA5SP412-201ENST00000516234 123 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 AC132192.2-201ENST00000596206 1147 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 AC010328.2-201ENST00000597698 1111 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 AC009542.2-202ENST00000619004 1067 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ERCC2P18074 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.11■□□□□ 0.01
ERCC2P18074 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ERCC2P18074 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ERCC2P18074 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.1■□□□□ 0.01
ERCC2P18074 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ERCC2P18074 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC2P18074 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC2P18074 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.1■□□□□ 0.01
ERCC2P18074 AC027237.1-201ENST00000560942 655 ntBASIC15.1■□□□□ 0.01
ERCC2P18074 AC009955.4-201ENST00000597192 544 ntBASIC15.1■□□□□ 0.01
ERCC2P18074 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.1■□□□□ 0.01
ERCC2P18074 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.1■□□□□ 0.01
ERCC2P18074 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.1■□□□□ 0.01
ERCC2P18074 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERCC2P18074 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC2P18074 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 AC015818.8-201ENST00000587907 1519 ntBASIC15.09■□□□□ 0.01
ERCC2P18074 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
ERCC2P18074 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC2P18074 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.09■□□□□ 0.01
ERCC2P18074 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ERCC2P18074 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC2P18074 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms