Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 IFNWP2-201ENST00000431203 580 ntBASIC15.72■□□□□ 0.11
SYN1P17600 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.72■□□□□ 0.11
SYN1P17600 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.72■□□□□ 0.11
SYN1P17600 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.72■□□□□ 0.11
SYN1P17600 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.72■□□□□ 0.11
SYN1P17600 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.72■□□□□ 0.11
SYN1P17600 MIR4254-201ENST00000581063 76 ntBASIC15.72■□□□□ 0.11
SYN1P17600 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.72■□□□□ 0.11
SYN1P17600 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.72■□□□□ 0.11
SYN1P17600 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.72■□□□□ 0.11
SYN1P17600 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.72■□□□□ 0.11
SYN1P17600 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
SYN1P17600 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.72■□□□□ 0.11
SYN1P17600 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.72■□□□□ 0.11
SYN1P17600 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYN1P17600 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
SYN1P17600 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 PGAM1P11-201ENST00000416729 680 ntBASIC15.71■□□□□ 0.11
SYN1P17600 AL080243.1-201ENST00000423293 1060 ntBASIC15.71■□□□□ 0.11
SYN1P17600 EEF1DP5-201ENST00000431410 772 ntBASIC15.71■□□□□ 0.11
SYN1P17600 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.71■□□□□ 0.11
SYN1P17600 RN7SL767P-201ENST00000493013 295 ntBASIC15.71■□□□□ 0.11
SYN1P17600 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.71■□□□□ 0.11
SYN1P17600 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.71■□□□□ 0.11
SYN1P17600 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.71■□□□□ 0.11
SYN1P17600 AC091304.3-201ENST00000566500 716 ntBASIC15.71■□□□□ 0.11
SYN1P17600 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 AC004466.2-201ENST00000614749 516 ntBASIC15.71■□□□□ 0.11
SYN1P17600 AC090510.3-201ENST00000615831 821 ntBASIC15.71■□□□□ 0.11
SYN1P17600 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC15.71■□□□□ 0.11
SYN1P17600 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SYN1P17600 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SYN1P17600 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYN1P17600 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYN1P17600 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.71■□□□□ 0.1
SYN1P17600 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYN1P17600 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SYN1P17600 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SYN1P17600 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.71■□□□□ 0.1
SYN1P17600 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 DOC2GP-204ENST00000639052 2548 ntBASIC15.7■□□□□ 0.1
SYN1P17600 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.7■□□□□ 0.1
SYN1P17600 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SYN1P17600 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SYN1P17600 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 GRPEL2P1-201ENST00000453145 339 ntBASIC15.7■□□□□ 0.1
SYN1P17600 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.7■□□□□ 0.1
SYN1P17600 GPX3-202ENST00000517973 612 ntTSL 3 BASIC15.7■□□□□ 0.1
SYN1P17600 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.7■□□□□ 0.1
SYN1P17600 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.7■□□□□ 0.1
SYN1P17600 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SYN1P17600 RN7SL602P-201ENST00000578326 324 ntBASIC15.7■□□□□ 0.1
SYN1P17600 RN7SL718P-201ENST00000581254 303 ntBASIC15.7■□□□□ 0.1
SYN1P17600 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.7■□□□□ 0.1
SYN1P17600 AC080013.5-201ENST00000607044 679 ntBASIC15.7■□□□□ 0.1
SYN1P17600 AL021707.6-201ENST00000609212 491 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms