Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCAP17252 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PRKCAP17252 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PRKCAP17252 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCAP17252 AC005229.1-201ENST00000392885 409 ntBASIC13.72□□□□□ -0.21
PRKCAP17252 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PRKCAP17252 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
PRKCAP17252 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 AC026434.2-201ENST00000506094 1078 ntBASIC13.72□□□□□ -0.21
PRKCAP17252 SLC25A47P1-201ENST00000531577 414 ntBASIC13.72□□□□□ -0.21
PRKCAP17252 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 AC233724.13-201ENST00000598383 410 ntBASIC13.72□□□□□ -0.21
PRKCAP17252 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCAP17252 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCAP17252 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PRKCAP17252 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCAP17252 CICP16-201ENST00000502609 2813 ntBASIC13.72□□□□□ -0.21
PRKCAP17252 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCAP17252 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 AC083964.2-201ENST00000623988 2396 ntBASIC13.71□□□□□ -0.21
PRKCAP17252 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
PRKCAP17252 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.71□□□□□ -0.21
PRKCAP17252 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCAP17252 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PRKCAP17252 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PRKCAP17252 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.71□□□□□ -0.22
PRKCAP17252 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms