Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RHOQP2-201ENST00000449922 579 ntBASIC24.18■■□□□ 1.46
CFTRP13569 ALG1L15P-201ENST00000482834 794 ntBASIC24.18■■□□□ 1.46
CFTRP13569 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC24.18■■□□□ 1.46
CFTRP13569 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC24.18■■□□□ 1.46
CFTRP13569 MIR8071-1-201ENST00000616769 65 ntBASIC24.18■■□□□ 1.46
CFTRP13569 MIR8071-2-201ENST00000616772 65 ntBASIC24.18■■□□□ 1.46
CFTRP13569 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFTRP13569 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFTRP13569 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CFTRP13569 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFTRP13569 PES1P2-201ENST00000449745 1735 ntBASIC24.18■■□□□ 1.46
CFTRP13569 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CFTRP13569 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC24.18■■□□□ 1.46
CFTRP13569 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 RN7SL578P-201ENST00000477781 283 ntBASIC24.17■■□□□ 1.46
CFTRP13569 TBC1D3P6-201ENST00000505954 962 ntBASIC24.17■■□□□ 1.46
CFTRP13569 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC24.17■■□□□ 1.46
CFTRP13569 AL109954.1-202ENST00000564051 2148 ntBASIC24.17■■□□□ 1.46
CFTRP13569 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 RN7SL605P-201ENST00000577229 281 ntBASIC24.17■■□□□ 1.46
CFTRP13569 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 HLF-202ENST00000430986 1385 ntTSL 2 BASIC24.17■■□□□ 1.46
CFTRP13569 PGR-210ENST00000619228 3038 ntTSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CFTRP13569 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC24.17■■□□□ 1.46
CFTRP13569 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC24.16■■□□□ 1.46
CFTRP13569 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC24.16■■□□□ 1.46
CFTRP13569 PPT1-215ENST00000641471 2368 ntBASIC24.16■■□□□ 1.46
CFTRP13569 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CFTRP13569 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
CFTRP13569 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC24.16■■□□□ 1.46
CFTRP13569 RN7SL846P-201ENST00000467429 292 ntBASIC24.16■■□□□ 1.46
CFTRP13569 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
CFTRP13569 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC24.16■■□□□ 1.46
CFTRP13569 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CFTRP13569 DOC2GP-204ENST00000639052 2548 ntBASIC24.15■■□□□ 1.46
CFTRP13569 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CFTRP13569 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 AIG1-203ENST00000367596 559 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 FAM197Y6-201ENST00000420524 766 ntBASIC24.15■■□□□ 1.46
CFTRP13569 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 RN7SL684P-201ENST00000465665 294 ntBASIC24.15■■□□□ 1.46
CFTRP13569 AC092910.2-201ENST00000491262 348 ntBASIC24.15■■□□□ 1.46
CFTRP13569 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC24.15■■□□□ 1.46
CFTRP13569 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC24.15■■□□□ 1.46
CFTRP13569 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC24.15■■□□□ 1.46
CFTRP13569 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 ZEB1-AS1-208ENST00000607166 2503 ntBASIC24.15■■□□□ 1.46
CFTRP13569 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC24.15■■□□□ 1.46
CFTRP13569 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CFTRP13569 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC24.14■■□□□ 1.46
CFTRP13569 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CFTRP13569 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CFTRP13569 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
CFTRP13569 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC24.14■■□□□ 1.46
CFTRP13569 HNRNPA1P10-201ENST00000444945 962 ntBASIC24.14■■□□□ 1.46
CFTRP13569 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC24.14■■□□□ 1.46
CFTRP13569 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CFTRP13569 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC24.14■■□□□ 1.46
CFTRP13569 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC24.14■■□□□ 1.46
CFTRP13569 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CFTRP13569 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC24.14■■□□□ 1.45
CFTRP13569 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CFTRP13569 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CFTRP13569 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CFTRP13569 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC24.14■■□□□ 1.45
CFTRP13569 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms