Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 AC233724.13-201ENST00000598383 410 ntBASIC13.56□□□□□ -0.24
THBS1P07996 ACTG1P22-201ENST00000603793 1099 ntBASIC13.56□□□□□ -0.24
THBS1P07996 AL022328.1-201ENST00000610050 478 ntBASIC13.56□□□□□ -0.24
THBS1P07996 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 KRT8P24-201ENST00000560290 1559 ntBASIC13.56□□□□□ -0.24
THBS1P07996 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.56□□□□□ -0.24
THBS1P07996 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
THBS1P07996 AC009093.10-201ENST00000641956 1442 ntBASIC13.56□□□□□ -0.24
THBS1P07996 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
THBS1P07996 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.55□□□□□ -0.24
THBS1P07996 TTTY23B-201ENST00000442790 549 ntBASIC13.55□□□□□ -0.24
THBS1P07996 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.55□□□□□ -0.24
THBS1P07996 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 AC119751.2-201ENST00000504529 210 ntBASIC13.55□□□□□ -0.24
THBS1P07996 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 AC027237.1-201ENST00000560942 655 ntBASIC13.55□□□□□ -0.24
THBS1P07996 RAB43P1-201ENST00000561790 589 ntBASIC13.55□□□□□ -0.24
THBS1P07996 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.55□□□□□ -0.24
THBS1P07996 OR10B1P-201ENST00000601666 907 ntBASIC13.55□□□□□ -0.24
THBS1P07996 AC008825.2-201ENST00000603374 718 ntBASIC13.55□□□□□ -0.24
THBS1P07996 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 AC002472.3-201ENST00000640124 621 ntBASIC13.55□□□□□ -0.24
THBS1P07996 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
THBS1P07996 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.55□□□□□ -0.24
THBS1P07996 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 KRT8P28-201ENST00000433288 1390 ntBASIC13.55□□□□□ -0.24
THBS1P07996 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.55□□□□□ -0.24
THBS1P07996 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
THBS1P07996 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
THBS1P07996 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.55□□□□□ -0.24
THBS1P07996 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.54□□□□□ -0.24
THBS1P07996 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
THBS1P07996 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
THBS1P07996 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms