Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 AC022137.2-201ENST00000503482 481 ntBASIC13.49□□□□□ -0.25
HIST1H2ABP04908 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 PTP4A1P2-201ENST00000546033 454 ntBASIC13.49□□□□□ -0.25
HIST1H2ABP04908 AC190387.1-201ENST00000551683 408 ntBASIC13.49□□□□□ -0.25
HIST1H2ABP04908 TP53TG3HP-202ENST00000569755 579 ntBASIC13.49□□□□□ -0.25
HIST1H2ABP04908 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H2ABP04908 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AC092135.3-201ENST00000624151 1846 ntBASIC13.48□□□□□ -0.25
HIST1H2ABP04908 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 LINC01230-201ENST00000625222 3017 ntBASIC13.48□□□□□ -0.25
HIST1H2ABP04908 REXO1L1P-201ENST00000379010 6598 ntBASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H2ABP04908 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 AC134312.5-201ENST00000568031 1313 ntBASIC13.47□□□□□ -0.25
HIST1H2ABP04908 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H2ABP04908 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms