Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CD3DP04234 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.5□□□□□ -0.41
CD3DP04234 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
CD3DP04234 AL512361.1-201ENST00000554200 418 ntBASIC12.5□□□□□ -0.41
CD3DP04234 AC093520.2-201ENST00000561830 333 ntBASIC12.5□□□□□ -0.41
CD3DP04234 AC040169.1-201ENST00000565382 521 ntBASIC12.5□□□□□ -0.41
CD3DP04234 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.5□□□□□ -0.41
CD3DP04234 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CD3DP04234 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CD3DP04234 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.5□□□□□ -0.41
CD3DP04234 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CD3DP04234 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.49□□□□□ -0.41
CD3DP04234 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 AL590627.1-203ENST00000421194 1026 ntBASIC12.49□□□□□ -0.41
CD3DP04234 AC004832.2-201ENST00000426397 482 ntBASIC12.49□□□□□ -0.41
CD3DP04234 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.49□□□□□ -0.41
CD3DP04234 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.49□□□□□ -0.41
CD3DP04234 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.49□□□□□ -0.41
CD3DP04234 SLC25A1P1-201ENST00000528351 927 ntBASIC12.49□□□□□ -0.41
CD3DP04234 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.49□□□□□ -0.41
CD3DP04234 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.49□□□□□ -0.41
CD3DP04234 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.49□□□□□ -0.41
CD3DP04234 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.49□□□□□ -0.41
CD3DP04234 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 AP002761.4-201ENST00000565433 3361 ntBASIC12.49□□□□□ -0.41
CD3DP04234 AL731571.1-201ENST00000617058 5428 ntBASIC12.49□□□□□ -0.41
CD3DP04234 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.49□□□□□ -0.41
CD3DP04234 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD3DP04234 AC135782.3-201ENST00000562782 2105 ntBASIC12.49□□□□□ -0.41
CD3DP04234 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms