Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 SHC1P1-201ENST00000425230 1745 ntBASIC15.11■□□□□ 0.01
MT-CO1P00395 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
MT-CO1P00395 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MT-CO1P00395 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC140479.7-201ENST00000636301 2332 ntBASIC15.1■□□□□ 0.01
MT-CO1P00395 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC010141.1-201ENST00000411585 623 ntBASIC15.1■□□□□ 0.01
MT-CO1P00395 AC006033.1-201ENST00000440505 426 ntBASIC15.1■□□□□ 0.01
MT-CO1P00395 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.1■□□□□ 0.01
MT-CO1P00395 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AL022328.3-201ENST00000607943 679 ntBASIC15.1■□□□□ 0.01
MT-CO1P00395 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 AC020907.1-201ENST00000616460 1350 ntBASIC15.1■□□□□ 0.01
MT-CO1P00395 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MT-CO1P00395 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MT-CO1P00395 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.1■□□□□ 0.01
MT-CO1P00395 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
MT-CO1P00395 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.09■□□□□ 0.01
MT-CO1P00395 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.09■□□□□ 0.01
MT-CO1P00395 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.09■□□□□ 0.01
MT-CO1P00395 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 POM121L10P-201ENST00000436994 1285 ntBASIC15.09■□□□□ 0.01
MT-CO1P00395 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AC099548.2-209ENST00000480264 625 ntBASIC15.09■□□□□ 0.01
MT-CO1P00395 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.09■□□□□ 0.01
MT-CO1P00395 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AC009955.4-201ENST00000597192 544 ntBASIC15.09■□□□□ 0.01
MT-CO1P00395 MIR6787-201ENST00000616675 61 ntBASIC15.09■□□□□ 0.01
MT-CO1P00395 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MT-CO1P00395 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MT-CO1P00395 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MT-CO1P00395 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms