Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 MIR4750-201ENST00000584564 56 ntBASIC16.94■□□□□ 0.3
USP17L11C9JVI0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.94■□□□□ 0.3
USP17L11C9JVI0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP17L11C9JVI0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 AC242376.2-201ENST00000619355 883 ntBASIC16.93■□□□□ 0.3
USP17L11C9JVI0 YRDCP1-201ENST00000621419 643 ntBASIC16.93■□□□□ 0.3
USP17L11C9JVI0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.93■□□□□ 0.3
USP17L11C9JVI0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 CICP24-201ENST00000605464 2705 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AC067930.6-201ENST00000623257 4947 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 RNA5SP359-201ENST00000364838 113 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 OR2R1P-201ENST00000441404 914 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 RPSAP15-201ENST00000448168 861 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AC130709.1-201ENST00000484779 1212 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 PGAM1P5-201ENST00000548011 764 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AC093752.3-201ENST00000567343 901 ntBASIC16.92■□□□□ 0.3
USP17L11C9JVI0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.92■□□□□ 0.3
USP17L11C9JVI0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms