Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM88BA6NKF7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
TMEM88BA6NKF7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM88BA6NKF7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM88BA6NKF7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 AC006504.5-208ENST00000588784 2401 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 FDPSP7-201ENST00000429043 1054 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 RPL18AP15-201ENST00000430258 517 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 AL954722.1-201ENST00000431238 259 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 NAT9-219ENST00000582524 573 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 LAP3P2-201ENST00000454686 1454 ntBASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM88BA6NKF7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 ASS1P1-201ENST00000402854 1237 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 RN7SKP212-201ENST00000410851 328 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 HMGA1P2-201ENST00000430198 324 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 RPSAP12-201ENST00000435879 888 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 AC010531.8-201ENST00000623341 685 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 AC079416.2-201ENST00000625035 1193 ntBASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM88BA6NKF7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 LINC02199-201ENST00000506655 2702 ntBASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM88BA6NKF7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms