Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 AC092364.2-202ENST00000597012 1073 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 MIR6074-201ENST00000612054 107 ntBASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV18A0A075B6X5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.71□□□□□ -0.38
TRAV18A0A075B6X5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC114271.1-201ENST00000612689 2813 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC068760.1-201ENST00000493579 1953 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC005829.1-201ENST00000570002 483 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AL157996.1-201ENST00000624684 2299 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC004241.5-201ENST00000623870 2448 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 AC015688.4-201ENST00000580780 1647 ntBASIC12.7□□□□□ -0.38
TRAV18A0A075B6X5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV18A0A075B6X5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms