Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 HLA-DMA-202ENST00000395303 1007 ntBASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 AC104961.1-201ENST00000427605 771 ntBASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 AC132825.4-202ENST00000578792 434 ntBASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDC42BPBQ9Y5S2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC21.39■■□□□ 1.02
CDC42BPBQ9Y5S2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC21.39■■□□□ 1.02
CDC42BPBQ9Y5S2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDC42BPBQ9Y5S2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CDC42BPBQ9Y5S2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 RPL13AP3-202ENST00000494676 1473 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 U3.5-201ENST00000363448 216 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 SNORA57-201ENST00000383870 149 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 AC136604.1-202ENST00000425471 771 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 ASS1P2-201ENST00000439895 1223 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 AC100858.1-201ENST00000514059 1228 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 CD44-224ENST00000526669 870 ntTSL 5 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 AC010531.8-201ENST00000623341 685 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 AC092115.1-201ENST00000566277 1402 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 MTHFR-210ENST00000641407 2387 ntBASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDC42BPBQ9Y5S2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 ACTBP14-201ENST00000411655 1089 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 PGAM1P11-201ENST00000416729 680 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 AC023157.3-201ENST00000619086 2088 ntBASIC21.38■■□□□ 1.01
CDC42BPBQ9Y5S2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms