Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AC025279.2-201ENST00000569730 653 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AL354718.3-201ENST00000616414 581 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CR382287.1-201ENST00000623954 586 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AC011498.7-201ENST00000624986 2027 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 KRT8P24-201ENST00000560290 1559 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AC007389.4-201ENST00000454674 793 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AL391280.1-201ENST00000506969 1062 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 RNA5SP486-201ENST00000515961 83 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AP001889.1-201ENST00000525414 633 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AC015936.2-201ENST00000593177 259 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 RPSAP52-203ENST00000622976 1023 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.36□□□□□ -0.11
TNPO3Q9Y5L0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNPO3Q9Y5L0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms