Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IFT52Q9Y366 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IFT52Q9Y366 AC015909.5-201ENST00000624336 2266 ntBASIC13.88□□□□□ -0.19
IFT52Q9Y366 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.88□□□□□ -0.19
IFT52Q9Y366 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.88□□□□□ -0.19
IFT52Q9Y366 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.88□□□□□ -0.19
IFT52Q9Y366 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
IFT52Q9Y366 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IFT52Q9Y366 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AC083964.2-201ENST00000623988 2396 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AC007969.1-201ENST00000433675 447 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 FAM207CP-201ENST00000443486 507 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 MYCLP2-201ENST00000449268 967 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 AC026434.2-201ENST00000506094 1078 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 SERBP1P5-201ENST00000510079 1181 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AL132655.2-201ENST00000596276 594 ntBASIC13.87□□□□□ -0.19
IFT52Q9Y366 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IFT52Q9Y366 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
IFT52Q9Y366 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 CICP16-201ENST00000502609 2813 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 MIR770-201ENST00000390219 98 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 ACTBP8-201ENST00000403258 1108 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 UGT1A2P-201ENST00000454886 866 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 AP001063.1-201ENST00000568332 529 ntBASIC13.86□□□□□ -0.19
IFT52Q9Y366 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IFT52Q9Y366 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
IFT52Q9Y366 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms