Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
UBE2D4Q9Y2X8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AL591122.2-201ENST00000624125 1853 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC109322.1-201ENST00000524499 1264 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC131206.1-201ENST00000538078 1211 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC140878.1-201ENST00000565277 250 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AL671883.3-201ENST00000603274 991 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 AC027612.4-201ENST00000605371 583 ntBASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
UBE2D4Q9Y2X8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
UBE2D4Q9Y2X8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC100757.3-201ENST00000622361 1406 ntBASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
UBE2D4Q9Y2X8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms