Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 MED15P5-201ENST00000423150 992 ntBASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 KRT18P32-201ENST00000424695 1287 ntBASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 ACTG1P14-201ENST00000446382 1122 ntBASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 KRT18P3-201ENST00000451602 1288 ntBASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 AC140113.2-201ENST00000604370 208 ntBASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RCL1Q9Y2P8 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AL157996.1-201ENST00000624684 2299 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AC005237.2-201ENST00000434368 219 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AC092364.2-202ENST00000597012 1073 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AL589739.1-201ENST00000607720 493 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 MIR6074-201ENST00000612054 107 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AL158070.2-201ENST00000623713 1621 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 AC093525.8-201ENST00000624099 1342 ntBASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.07□□□□□ -0.48
RCL1Q9Y2P8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.06□□□□□ -0.48
RCL1Q9Y2P8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms