Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CICP14-201ENST00000629111 2732 ntBASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 NKAIN1P1-201ENST00000435754 582 ntBASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 SERPINA13P-202ENST00000478994 924 ntBASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 MESTP3-201ENST00000503460 968 ntBASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL390755.1-201ENST00000623716 2027 ntBASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL662890.1-201ENST00000396818 632 ntBASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AC138649.2-201ENST00000615886 705 ntBASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA1Q9UND3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms