Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPS2P36-201ENST00000456516 831 ntBASIC16.44■□□□□ 0.22
COL20A1Q9P218 RN7SL530P-201ENST00000485097 298 ntBASIC16.44■□□□□ 0.22
COL20A1Q9P218 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.44■□□□□ 0.22
COL20A1Q9P218 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL20A1Q9P218 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
COL20A1Q9P218 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SIGLEC18P-201ENST00000602271 909 ntBASIC16.43■□□□□ 0.22
COL20A1Q9P218 SPCS2P2-201ENST00000603270 608 ntBASIC16.43■□□□□ 0.22
COL20A1Q9P218 AC073352.2-201ENST00000609385 439 ntBASIC16.43■□□□□ 0.22
COL20A1Q9P218 AC051619.9-201ENST00000623237 597 ntBASIC16.43■□□□□ 0.22
COL20A1Q9P218 AL353726.2-201ENST00000623259 884 ntBASIC16.43■□□□□ 0.22
COL20A1Q9P218 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL20A1Q9P218 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
COL20A1Q9P218 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 LAP3P2-201ENST00000454686 1454 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC097359.2-201ENST00000604992 2389 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 OR8T1P-201ENST00000421347 918 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AP000358.1-201ENST00000456260 156 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 MIR3147-201ENST00000577811 66 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC104506.1-201ENST00000609247 429 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 YRDCP1-201ENST00000621419 643 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 AL591471.1-201ENST00000621855 229 ntBASIC16.42■□□□□ 0.22
COL20A1Q9P218 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.42■□□□□ 0.22
COL20A1Q9P218 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL20A1Q9P218 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms