Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 MRPL37P1-201ENST00000592451 1337 ntBASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CUEDC1Q9NWM3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 AL136309.1-201ENST00000403917 691 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 CALR4P-201ENST00000431943 946 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 HIST2H2BB-201ENST00000449108 381 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 HOMER2P2-201ENST00000451621 847 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 MIR4741-201ENST00000579822 90 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 AL358472.3-201ENST00000608147 415 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 ZACNP1-201ENST00000612259 710 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 MIR6727-201ENST00000620702 65 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 CFTRP2-201ENST00000634304 199 ntBASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CUEDC1Q9NWM3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 CHMP1AP1-201ENST00000445563 662 ntBASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CUEDC1Q9NWM3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms