Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 GK-202ENST00000378941 458 ntTSL 3 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 MIR4783-201ENST00000580343 82 ntBASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 EEF1DP1-201ENST00000585891 896 ntBASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMC4Q9NTJ3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AC079178.1-201ENST00000420915 656 ntBASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 SORD2P-201ENST00000558556 1069 ntBASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AC132192.2-201ENST00000596206 1147 ntBASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 MIR6074-201ENST00000612054 107 ntBASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMC4Q9NTJ3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 AC009093.10-201ENST00000641956 1442 ntBASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMC4Q9NTJ3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMC4Q9NTJ3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMC4Q9NTJ3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMC4Q9NTJ3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMC4Q9NTJ3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMC4Q9NTJ3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms