Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HSPA8P5-201ENST00000456928 2069 ntBASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 MIR4683-201ENST00000579659 81 ntBASIC14.06□□□□□ -0.16
BRF2Q9HAW0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BRF2Q9HAW0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 NME2P1-201ENST00000426182 414 ntBASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AL355994.2-201ENST00000447882 704 ntBASIC14.05□□□□□ -0.16
BRF2Q9HAW0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AC005586.2-201ENST00000563946 837 ntBASIC14.05□□□□□ -0.16
BRF2Q9HAW0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AL358472.3-201ENST00000608147 415 ntBASIC14.05□□□□□ -0.16
BRF2Q9HAW0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AC027601.3-201ENST00000622907 509 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms