Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 CICP20-201ENST00000443330 2801 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SCARNA21-201ENST00000517026 139 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 C2orf69P1-201ENST00000563532 1093 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 MIR6769A-201ENST00000617340 73 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 CASP16P-204ENST00000635032 809 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 FAM90A7P-201ENST00000382628 1395 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 FAM90A23P-201ENST00000400136 1395 ntBASIC17.14■□□□□ 0.33
EFCC1Q9HA90 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCC1Q9HA90 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC244394.1-201ENST00000435000 1665 ntBASIC17.13■□□□□ 0.33
EFCC1Q9HA90 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.13■□□□□ 0.33
EFCC1Q9HA90 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCC1Q9HA90 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AC068587.6-202ENST00000641839 5619 ntBASIC17.12■□□□□ 0.33
EFCC1Q9HA90 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFCC1Q9HA90 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms