Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AC025181.2-201ENST00000606994 802 ntBASIC13.77□□□□□ -0.21
TM9SF2Q99805 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AC092933.1-201ENST00000393644 945 ntBASIC13.76□□□□□ -0.21
TM9SF2Q99805 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 RPL7P3-201ENST00000441388 714 ntBASIC13.76□□□□□ -0.21
TM9SF2Q99805 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TM9SF2Q99805 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 AC092135.3-201ENST00000624151 1846 ntBASIC13.76□□□□□ -0.21
TM9SF2Q99805 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TM9SF2Q99805 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TM9SF2Q99805 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 SNX29P1-201ENST00000548357 1007 ntBASIC13.75□□□□□ -0.21
TM9SF2Q99805 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.75□□□□□ -0.21
TM9SF2Q99805 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms