Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 HSPA8P5-201ENST00000456928 2069 ntBASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AC100850.1-201ENST00000506768 649 ntBASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AC132192.2-201ENST00000596206 1147 ntBASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 MIR600HG-201ENST00000449175 5984 ntBASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 DUX4L46-201ENST00000566845 751 ntBASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
CSPG4P5Q96PW8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms