Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC018846.1-201ENST00000568231 183 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SNORD3B-1-201ENST00000577988 758 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 RN7SL121P-201ENST00000584223 273 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC004686.1-201ENST00000605113 538 ntBASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM43Q96BQ3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 AP000354.1-201ENST00000396982 456 ntBASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 AC004522.1-201ENST00000419978 654 ntBASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 RPL3P5-201ENST00000441645 1232 ntBASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 AC145285.5-201ENST00000562217 361 ntBASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM43Q96BQ3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AC126365.1-201ENST00000578585 1514 ntBASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM43Q96BQ3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms