Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS33AQ96AX1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 AL136172.1-201ENST00000598590 1394 ntBASIC14.21□□□□□ -0.14
VPS33AQ96AX1 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS33AQ96AX1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC215219.1-201ENST00000400706 1817 ntBASIC14.2□□□□□ -0.14
VPS33AQ96AX1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC022616.1-201ENST00000518688 554 ntBASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TPRX2P-201ENST00000535362 881 ntBASIC14.2□□□□□ -0.14
VPS33AQ96AX1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC092364.2-202ENST00000597012 1073 ntBASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 AC022144.1-201ENST00000602255 1580 ntBASIC14.2□□□□□ -0.14
VPS33AQ96AX1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS33AQ96AX1 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC003102.2-201ENST00000589195 1469 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC007969.1-201ENST00000433675 447 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC004890.2-204ENST00000481968 304 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 RPL13AP25-201ENST00000484130 612 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AP001582.1-201ENST00000525856 295 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 BRI3BPP1-201ENST00000594224 787 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AP001160.2-201ENST00000596071 487 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AL390955.2-201ENST00000603032 514 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 AC079781.4-201ENST00000641908 219 ntBASIC14.19□□□□□ -0.14
VPS33AQ96AX1 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS33AQ96AX1 TCAM1P-207ENST00000485295 1537 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms