Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 RN7SKP230-201ENST00000365642 335 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 RN7SL837P-201ENST00000463010 287 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 GCOM2-201ENST00000509133 1104 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 AL354718.3-201ENST00000616414 581 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 CR382287.1-201ENST00000623954 586 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 MYADML-201ENST00000474610 2147 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 AL138709.1-201ENST00000614840 1693 ntBASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAF3IP1Q8TDR0 AC020910.5-201ENST00000623668 1865 ntBASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AP001889.1-201ENST00000525414 633 ntBASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC015936.2-201ENST00000593177 259 ntBASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 RPSAP52-203ENST00000622976 1023 ntBASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 AC025048.6-201ENST00000634326 1161 ntBASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAF3IP1Q8TDR0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms