Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AL591122.2-201ENST00000624125 1853 ntBASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AP000344.2-201ENST00000512987 629 ntBASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AC051619.7-201ENST00000568314 623 ntBASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 AL355385.1-201ENST00000606123 409 ntBASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB3IL1Q8TBN0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AL109936.8-201ENST00000641772 604 ntBASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB3IL1Q8TBN0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3IL1Q8TBN0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms