Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 AL023775.1-201ENST00000454907 1746 ntBASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC33Q8N5R6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 AC018735.1-201ENST00000437208 1502 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 FAM8A4P-201ENST00000435433 1213 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 AC005077.2-201ENST00000449786 690 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 AC004898.1-201ENST00000451057 766 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 DUX4L47-201ENST00000566374 394 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC33Q8N5R6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 COX5BP1-201ENST00000507622 393 ntBASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 SCARNA20.5-201ENST00000516991 142 ntBASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AC020914.3-201ENST00000594712 304 ntBASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AL451050.2-201ENST00000606967 682 ntBASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC33Q8N5R6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms