Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC27A1Q6PCB7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC27A1Q6PCB7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC27A1Q6PCB7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SLC27A1Q6PCB7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SLC27A1Q6PCB7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 ELK2AP-201ENST00000392510 1007 ntBASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 RN7SL258P-201ENST00000478664 300 ntBASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 AC079328.1-201ENST00000560358 952 ntBASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 MIR3907-201ENST00000579424 151 ntBASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 MIR6074-201ENST00000612054 107 ntBASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC27A1Q6PCB7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC015909.3-201ENST00000572855 1794 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 RNA5SP359-201ENST00000364838 113 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC234782.1-201ENST00000451950 919 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 TPT1P11-201ENST00000458482 498 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AL133499.1-201ENST00000596207 608 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 MIR6769A-201ENST00000617340 73 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AL591471.1-201ENST00000621855 229 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC006453.1-201ENST00000636037 1257 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC27A1Q6PCB7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms