Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 PCDHB18P-202ENST00000526308 3197 ntBASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AC084364.1-201ENST00000551967 1556 ntBASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AL589987.1-201ENST00000453380 819 ntBASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 UGT1A2P-201ENST00000454886 866 ntBASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 RARRES2P5-201ENST00000564013 466 ntBASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM53Q6P2H8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 SERBP1P5-201ENST00000510079 1181 ntBASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC104596.2-201ENST00000512793 793 ntBASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC055876.2-201ENST00000531834 546 ntBASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 MIR4745-201ENST00000577608 62 ntBASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 AL158212.4-201ENST00000624062 1286 ntBASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TMEM53Q6P2H8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms