Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.46□□□□□ -0.25
RBM48Q5RL73 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RBM48Q5RL73 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RBM48Q5RL73 AL355102.3-201ENST00000554299 1678 ntBASIC13.46□□□□□ -0.26
RBM48Q5RL73 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RBM48Q5RL73 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
RBM48Q5RL73 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
RBM48Q5RL73 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RBM48Q5RL73 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RBM48Q5RL73 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RBM48Q5RL73 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.46□□□□□ -0.26
RBM48Q5RL73 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.26
RBM48Q5RL73 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.46□□□□□ -0.26
RBM48Q5RL73 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 AGAP12P-201ENST00000585227 2359 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 ADH5P3-201ENST00000433842 1137 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 AL662844.1-201ENST00000546340 181 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 RN7SL828P-201ENST00000607615 303 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 AC055717.3-201ENST00000622967 595 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 LINC00628-201ENST00000628516 1289 ntBASIC13.45□□□□□ -0.26
RBM48Q5RL73 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.45□□□□□ -0.26
RBM48Q5RL73 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RBM48Q5RL73 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 AC093525.8-201ENST00000624099 1342 ntBASIC13.44□□□□□ -0.26
RBM48Q5RL73 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RBM48Q5RL73 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.44□□□□□ -0.26
RBM48Q5RL73 AC092865.6-201ENST00000642101 219 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms