Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.82□□□□□ -0.36
UBA52P62987 SNX29P1-201ENST00000548357 1007 ntBASIC12.82□□□□□ -0.36
UBA52P62987 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.82□□□□□ -0.36
UBA52P62987 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.82□□□□□ -0.36
UBA52P62987 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.82□□□□□ -0.36
UBA52P62987 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
UBA52P62987 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.82□□□□□ -0.36
UBA52P62987 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
UBA52P62987 AC015818.8-201ENST00000587907 1519 ntBASIC12.82□□□□□ -0.36
UBA52P62987 CES1P1-201ENST00000421606 1704 ntBASIC12.82□□□□□ -0.36
UBA52P62987 AC023090.2-201ENST00000625182 2110 ntBASIC12.82□□□□□ -0.36
UBA52P62987 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBA52P62987 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBA52P62987 AC134407.2-201ENST00000625089 1978 ntBASIC12.81□□□□□ -0.36
UBA52P62987 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBA52P62987 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 AC004945.1-201ENST00000416738 983 ntBASIC12.81□□□□□ -0.36
UBA52P62987 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 CROCCP4-201ENST00000457096 498 ntBASIC12.81□□□□□ -0.36
UBA52P62987 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 AC092552.1-201ENST00000547243 906 ntBASIC12.81□□□□□ -0.36
UBA52P62987 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.81□□□□□ -0.36
UBA52P62987 MIR4525-201ENST00000580000 75 ntBASIC12.81□□□□□ -0.36
UBA52P62987 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 AC010319.3-201ENST00000597028 470 ntBASIC12.81□□□□□ -0.36
UBA52P62987 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 REXO1L6P-201ENST00000603433 1515 ntBASIC12.81□□□□□ -0.36
UBA52P62987 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UBA52P62987 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.81□□□□□ -0.36
UBA52P62987 CYP4F24P-201ENST00000586049 1580 ntBASIC12.81□□□□□ -0.36
UBA52P62987 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.81□□□□□ -0.36
UBA52P62987 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UBA52P62987 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
UBA52P62987 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
UBA52P62987 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBA52P62987 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.8□□□□□ -0.36
UBA52P62987 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms