Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CLDN17P56750 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN17P56750 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN17P56750 CNN2P10-201ENST00000443067 918 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 PUDPP3-201ENST00000445368 636 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 HOMER2P2-201ENST00000451621 847 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 ALG3P1-201ENST00000508806 1114 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN17P56750 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 IGHV3-71-201ENST00000523324 359 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN17P56750 AP006547.1-201ENST00000563435 692 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN17P56750 AC133552.6-201ENST00000613406 534 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 AC008687.7-202ENST00000637404 953 ntBASIC13.17□□□□□ -0.3
CLDN17P56750 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN17P56750 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN17P56750 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN17P56750 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN17P56750 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 AC015802.1-201ENST00000588104 1449 ntBASIC13.16□□□□□ -0.3
CLDN17P56750 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN17P56750 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 AL355994.2-201ENST00000447882 704 ntBASIC13.16□□□□□ -0.3
CLDN17P56750 AC022210.1-201ENST00000449856 793 ntBASIC13.16□□□□□ -0.3
CLDN17P56750 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.16□□□□□ -0.3
CLDN17P56750 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN17P56750 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN17P56750 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 C2orf69P2-201ENST00000562032 1123 ntBASIC13.16□□□□□ -0.3
CLDN17P56750 AP005482.1-201ENST00000563722 1273 ntBASIC13.16□□□□□ -0.3
CLDN17P56750 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLDN17P56750 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.16□□□□□ -0.3
CLDN17P56750 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.16□□□□□ -0.3
CLDN17P56750 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
CLDN17P56750 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLDN17P56750 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN17P56750 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN17P56750 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN17P56750 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN17P56750 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN17P56750 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN17P56750 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms