Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CMC4P56277 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
CMC4P56277 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 AC099063.4-201ENST00000641099 1602 ntBASIC10.95□□□□□ -0.66
CMC4P56277 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 CSPG4P11-201ENST00000560634 4910 ntBASIC10.95□□□□□ -0.66
CMC4P56277 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 LINC00554-201ENST00000564841 3011 ntBASIC10.95□□□□□ -0.66
CMC4P56277 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CMC4P56277 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 MIR663B-201ENST00000408361 115 ntBASIC10.95□□□□□ -0.66
CMC4P56277 HSPB1P2-201ENST00000448722 546 ntBASIC10.95□□□□□ -0.66
CMC4P56277 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC10.95□□□□□ -0.66
CMC4P56277 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 AC104982.3-201ENST00000581995 514 ntBASIC10.95□□□□□ -0.66
CMC4P56277 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 AL022328.3-201ENST00000607943 679 ntBASIC10.95□□□□□ -0.66
CMC4P56277 AC007663.3-201ENST00000609632 465 ntBASIC10.95□□□□□ -0.66
CMC4P56277 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 CICP23-201ENST00000605013 2741 ntBASIC10.95□□□□□ -0.66
CMC4P56277 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CMC4P56277 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 KHSRPP1-201ENST00000427983 1768 ntBASIC10.95□□□□□ -0.66
CMC4P56277 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CMC4P56277 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CMC4P56277 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC10.95□□□□□ -0.66
CMC4P56277 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 AL590440.2-201ENST00000641973 1595 ntBASIC10.94□□□□□ -0.66
CMC4P56277 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 MYADML-201ENST00000474610 2147 ntBASIC10.94□□□□□ -0.66
CMC4P56277 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 AL354702.1-201ENST00000442006 1960 ntBASIC10.94□□□□□ -0.66
CMC4P56277 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CMC4P56277 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CMC4P56277 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CMC4P56277 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC10.94□□□□□ -0.66
CMC4P56277 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.94□□□□□ -0.66
CMC4P56277 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms