Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.49□□□□□ -0.41
NKX2-5P52952 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NKX2-5P52952 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NKX2-5P52952 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX2-5P52952 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX2-5P52952 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 AL136982.4-201ENST00000437689 1740 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 AC009474.1-201ENST00000455096 1565 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.48□□□□□ -0.41
NKX2-5P52952 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NKX2-5P52952 KRT16P4-201ENST00000453883 522 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.48□□□□□ -0.41
NKX2-5P52952 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC12.48□□□□□ -0.41
NKX2-5P52952 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.48□□□□□ -0.41
NKX2-5P52952 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 GBP1P1-201ENST00000394662 1740 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 CSPG4P11-201ENST00000560634 4910 ntBASIC12.48□□□□□ -0.41
NKX2-5P52952 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NKX2-5P52952 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 KRT8P37-201ENST00000451609 1420 ntBASIC12.47□□□□□ -0.41
NKX2-5P52952 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NKX2-5P52952 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.47□□□□□ -0.41
NKX2-5P52952 AC096582.2-201ENST00000510860 516 ntBASIC12.47□□□□□ -0.41
NKX2-5P52952 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
NKX2-5P52952 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.47□□□□□ -0.41
NKX2-5P52952 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.47□□□□□ -0.41
NKX2-5P52952 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.47□□□□□ -0.41
NKX2-5P52952 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NKX2-5P52952 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NKX2-5P52952 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms