Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC063926.2-201ENST00000623766 1308 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AL031595.1-201ENST00000623969 4709 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 PUDPP3-201ENST00000445368 636 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC079316.1-201ENST00000548397 411 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 BX088702.1-201ENST00000610784 235 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 AC126335.2-201ENST00000623362 4637 ntBASIC13.13□□□□□ -0.31
CSNK1A1P48729 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSNK1A1P48729 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.13□□□□□ -0.31
CSNK1A1P48729 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
CSNK1A1P48729 AC131212.3-201ENST00000624087 4219 ntBASIC13.12□□□□□ -0.31
CSNK1A1P48729 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1A1P48729 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms