Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
KRT2P35908 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT2P35908 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 E2F3P2-201ENST00000447755 1422 ntBASIC16.85■□□□□ 0.29
KRT2P35908 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
KRT2P35908 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT2P35908 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT2P35908 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT2P35908 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT2P35908 DUX4L45-201ENST00000566406 1057 ntBASIC16.84■□□□□ 0.29
KRT2P35908 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 MIR4259-201ENST00000584466 101 ntBASIC16.84■□□□□ 0.29
KRT2P35908 AC132192.2-201ENST00000596206 1147 ntBASIC16.84■□□□□ 0.29
KRT2P35908 AC239800.4-201ENST00000603712 296 ntBASIC16.84■□□□□ 0.29
KRT2P35908 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT2P35908 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT2P35908 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT2P35908 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
KRT2P35908 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT2P35908 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 OR8S1-201ENST00000310194 1080 ntBASIC16.83■□□□□ 0.28
KRT2P35908 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT2P35908 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT2P35908 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT2P35908 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT2P35908 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT2P35908 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.83■□□□□ 0.28
KRT2P35908 AC079178.1-201ENST00000420915 656 ntBASIC16.83■□□□□ 0.28
KRT2P35908 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT2P35908 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 DUX4L46-201ENST00000566845 751 ntBASIC16.83■□□□□ 0.28
KRT2P35908 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT2P35908 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT2P35908 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
KRT2P35908 AL365209.1-201ENST00000624418 6473 ntBASIC16.83■□□□□ 0.28
KRT2P35908 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KRT2P35908 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT2P35908 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms