Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 POM121L8P-201ENST00000417732 1281 ntBASIC14.53□□□□□ -0.08
CDH3P22223 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 POM121L9P-203ENST00000441984 1285 ntBASIC14.53□□□□□ -0.08
CDH3P22223 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH3P22223 AC026434.2-201ENST00000506094 1078 ntBASIC14.53□□□□□ -0.08
CDH3P22223 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 MIR6799-201ENST00000620297 69 ntBASIC14.53□□□□□ -0.08
CDH3P22223 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH3P22223 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CDH3P22223 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CDH3P22223 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH3P22223 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH3P22223 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 MBLAC2-202ENST00000514906 1936 ntBASIC14.53□□□□□ -0.08
CDH3P22223 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH3P22223 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDH3P22223 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.52□□□□□ -0.08
CDH3P22223 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDH3P22223 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH3P22223 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CDH3P22223 TCAF1P1-201ENST00000414990 2232 ntBASIC14.52□□□□□ -0.08
CDH3P22223 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH3P22223 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH3P22223 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH3P22223 LINC01230-201ENST00000625222 3017 ntBASIC14.52□□□□□ -0.08
CDH3P22223 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 HOMER2P2-201ENST00000451621 847 ntBASIC14.52□□□□□ -0.09
CDH3P22223 RPL13AP20-201ENST00000459725 609 ntBASIC14.52□□□□□ -0.09
CDH3P22223 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH3P22223 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH3P22223 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH3P22223 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDH3P22223 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH3P22223 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH3P22223 OR10B1P-201ENST00000601666 907 ntBASIC14.52□□□□□ -0.09
CDH3P22223 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH3P22223 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH3P22223 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 AL139385.1-201ENST00000611744 3272 ntBASIC14.52□□□□□ -0.09
CDH3P22223 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH3P22223 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH3P22223 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 MROH4P-201ENST00000431302 1578 ntBASIC14.51□□□□□ -0.09
CDH3P22223 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 LILRP1-201ENST00000444199 1370 ntBASIC14.51□□□□□ -0.09
CDH3P22223 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH3P22223 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH3P22223 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH3P22223 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms