Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RAB3BP20337 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
RAB3BP20337 AL109936.8-201ENST00000641772 604 ntBASIC12.96□□□□□ -0.33
RAB3BP20337 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB3BP20337 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.96□□□□□ -0.34
RAB3BP20337 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB3BP20337 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB3BP20337 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAB3BP20337 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB3BP20337 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
RAB3BP20337 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB3BP20337 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
RAB3BP20337 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.96□□□□□ -0.34
RAB3BP20337 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAB3BP20337 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAB3BP20337 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RAB3BP20337 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RAB3BP20337 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
RAB3BP20337 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 CEND1P1-201ENST00000451006 455 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 RN7SL618P-201ENST00000477850 296 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 SDHAP3-202ENST00000515467 728 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 SLC25A1P1-201ENST00000528351 927 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB3BP20337 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 AL512361.1-201ENST00000554200 418 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.95□□□□□ -0.34
RAB3BP20337 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 ELL2P1-201ENST00000413990 1906 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB3BP20337 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RAB3BP20337 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 AL157996.1-201ENST00000624684 2299 ntBASIC12.95□□□□□ -0.34
RAB3BP20337 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB3BP20337 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 SALL4P5-201ENST00000419001 1760 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 AC083964.2-201ENST00000623988 2396 ntBASIC12.94□□□□□ -0.34
RAB3BP20337 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.94□□□□□ -0.34
RAB3BP20337 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RAB3BP20337 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RAB3BP20337 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RAB3BP20337 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms