Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDE6GP18545 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
PDE6GP18545 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC9.11□□□□□ -0.95
PDE6GP18545 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.11□□□□□ -0.95
PDE6GP18545 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC9.11□□□□□ -0.95
PDE6GP18545 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC9.11□□□□□ -0.95
PDE6GP18545 PAN3-AS1-201ENST00000563843 1351 ntBASIC9.11□□□□□ -0.95
PDE6GP18545 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PDE6GP18545 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PDE6GP18545 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 AC005332.1-201ENST00000577698 1310 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC9.1□□□□□ -0.95
PDE6GP18545 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 AGAP10P-201ENST00000454844 2418 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDE6GP18545 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDE6GP18545 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDE6GP18545 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 BET1L-206ENST00000486280 665 ntTSL 3 BASIC9.1□□□□□ -0.95
PDE6GP18545 RNA5SP410-201ENST00000516285 106 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDE6GP18545 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC9.1□□□□□ -0.95
PDE6GP18545 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 SAMD11P1-201ENST00000571429 661 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC9.1□□□□□ -0.95
PDE6GP18545 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC9.1□□□□□ -0.95
PDE6GP18545 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 AC099336.1-202ENST00000602961 463 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 AC025181.2-201ENST00000606994 802 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC9.1□□□□□ -0.95
PDE6GP18545 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 MARK2P9-201ENST00000430958 1727 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
PDE6GP18545 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 AGGF1P10-201ENST00000635005 2191 ntBASIC9.1□□□□□ -0.95
PDE6GP18545 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.1□□□□□ -0.95
PDE6GP18545 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
PDE6GP18545 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PDE6GP18545 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
PDE6GP18545 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
PDE6GP18545 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
PDE6GP18545 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
PDE6GP18545 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms