Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDH1P12830 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.4□□□□□ -0.1
CDH1P12830 CNN2P8-201ENST00000421872 913 ntBASIC14.4□□□□□ -0.1
CDH1P12830 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH1P12830 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.4□□□□□ -0.1
CDH1P12830 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.4□□□□□ -0.1
CDH1P12830 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.4□□□□□ -0.1
CDH1P12830 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CDH1P12830 RAB43P1-201ENST00000561790 589 ntBASIC14.4□□□□□ -0.1
CDH1P12830 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 AL162274.1-201ENST00000617191 1098 ntBASIC14.4□□□□□ -0.1
CDH1P12830 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDH1P12830 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.4□□□□□ -0.1
CDH1P12830 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDH1P12830 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CDH1P12830 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CDH1P12830 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH1P12830 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH1P12830 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH1P12830 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH1P12830 AC106820.3-201ENST00000561653 397 ntBASIC14.39□□□□□ -0.11
CDH1P12830 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH1P12830 AC106886.1-201ENST00000568660 600 ntBASIC14.39□□□□□ -0.11
CDH1P12830 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.39□□□□□ -0.11
CDH1P12830 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 OR10B1P-201ENST00000601666 907 ntBASIC14.39□□□□□ -0.11
CDH1P12830 AL512343.1-201ENST00000605837 169 ntBASIC14.39□□□□□ -0.11
CDH1P12830 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.39□□□□□ -0.11
CDH1P12830 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 AL354989.2-201ENST00000435838 1540 ntBASIC14.39□□□□□ -0.11
CDH1P12830 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH1P12830 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 MST1P2-201ENST00000457982 2291 ntBASIC14.39□□□□□ -0.11
CDH1P12830 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH1P12830 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH1P12830 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH1P12830 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH1P12830 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH1P12830 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms