Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TPM3P06753 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 AC093525.8-201ENST00000624099 1342 ntBASIC16.56■□□□□ 0.24
TPM3P06753 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.56■□□□□ 0.24
TPM3P06753 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.56■□□□□ 0.24
TPM3P06753 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 AC215219.1-201ENST00000400706 1817 ntBASIC16.56■□□□□ 0.24
TPM3P06753 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.56■□□□□ 0.24
TPM3P06753 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TPM3P06753 AL158070.2-201ENST00000623713 1621 ntBASIC16.56■□□□□ 0.24
TPM3P06753 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.56■□□□□ 0.24
TPM3P06753 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 Z82170.1-201ENST00000625081 3192 ntBASIC16.55■□□□□ 0.24
TPM3P06753 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM3P06753 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 TUBB3P1-201ENST00000405796 1332 ntBASIC16.55■□□□□ 0.24
TPM3P06753 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 HLA-K-203ENST00000430151 1046 ntBASIC16.55■□□□□ 0.24
TPM3P06753 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM3P06753 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.55■□□□□ 0.24
TPM3P06753 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TPM3P06753 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.55■□□□□ 0.24
TPM3P06753 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TPM3P06753 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.55■□□□□ 0.24
TPM3P06753 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms