Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.8□□□□□ -0.04
APOA4P06727 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
APOA4P06727 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
APOA4P06727 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOA4P06727 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 TMEM14DP-201ENST00000422205 345 ntBASIC14.79□□□□□ -0.04
APOA4P06727 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.79□□□□□ -0.04
APOA4P06727 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.79□□□□□ -0.04
APOA4P06727 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.79□□□□□ -0.04
APOA4P06727 FO681548.1-201ENST00000455617 1132 ntBASIC14.79□□□□□ -0.04
APOA4P06727 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.79□□□□□ -0.04
APOA4P06727 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.79□□□□□ -0.04
APOA4P06727 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.79□□□□□ -0.04
APOA4P06727 AL138709.1-201ENST00000614840 1693 ntBASIC14.79□□□□□ -0.04
APOA4P06727 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOA4P06727 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.79□□□□□ -0.04
APOA4P06727 ENPP7P14-201ENST00000621765 1040 ntBASIC14.79□□□□□ -0.04
APOA4P06727 AC132938.4-201ENST00000623835 848 ntBASIC14.79□□□□□ -0.04
APOA4P06727 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOA4P06727 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOA4P06727 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOA4P06727 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.78□□□□□ -0.04
APOA4P06727 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
APOA4P06727 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 KRT8P24-201ENST00000560290 1559 ntBASIC14.78□□□□□ -0.04
APOA4P06727 AC011840.2-201ENST00000563063 1520 ntBASIC14.78□□□□□ -0.04
APOA4P06727 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOA4P06727 AC020910.6-201ENST00000623084 1459 ntBASIC14.78□□□□□ -0.04
APOA4P06727 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOA4P06727 TPM3P8-201ENST00000330554 643 ntBASIC14.78□□□□□ -0.04
APOA4P06727 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms